PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ciclev10001113m
Common NameCICLE_v100010812mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 454aa    MW: 50075.8 Da    PI: 8.4738
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ciclev10001113mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.91.2e-09165205545
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                      k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Ciclev10001113m 165 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 205
                      7889************************9777777666555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-7161224IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415163207IPR004827Basic-leucine zipper domain
PfamPF001709.5E-7165205IPR004827Basic-leucine zipper domain
CDDcd147085.48E-22165217No hitNo description
SuperFamilySSF579596.88E-7165208No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-7166209No hitNo description
PROSITE patternPS000360168183IPR004827Basic-leucine zipper domain
PfamPF141441.4E-32247320IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    Send to blast
MPSFDSQFSN SEKLCTEGTT IQSNRGSNLG AFEQSVGFRL GDAVNLTGNT VLNSTKASGQ  60
ANTSDPLQIV TFDKSPTASN FNLSTIQVES HRLPFEKNHR SNLVSISSGN TENWGESNMA  120
DASPRTDIST DADTDEKNQR FDRGQSTAVV ASDSSDRSKD KLDQKTLRRL AQNREAARKS  180
RLRKKAYVQQ LESSRLKLTQ LEQELQRARQ QGIFISSSGD QTHSMSGNGA MAFDVEYARW  240
LEEQNKQINE LRSAVNSHAS DTELRMVVDG IMAHYDEIFR LKANAAKADV FHLLSGMWKT  300
PAERCFMWLG GFRSSELLKL EPLTEQQLVG IGNLQQSSQQ AEDALSQGME ALQQSLAETL  360
SSGSLGSSGS GNVANYMGQM AMAMGKLGTL EGFIRQADNL RQQTLQQMHR ILTTRQSARA  420
LLAIHDYFSR LRAPSSLGRA PPREGRCIVF FAR*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ccl.116140.0fruit
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006432429.10.0hypothetical protein CICLE_v100010812mg
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLV4V1M90.0V4V1M9_9R
STRINGVIT_13s0084g00660.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-161TGACG motif-binding factor 6